BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039B12LP1|AL430667
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1709 1666 0.0
>3x_Contig1709
Length = 16948
Score = 1666 bits (832), Expect = 0.0
Identities = 896/920 (97%), Gaps = 5/920 (0%)
Strand = Plus / Minus
Query: 2 taytgtttcaaagagacaccggattcgacaactgcgtttcaaattctagcaccgtcacag 61
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5965 tactgtttcaaagagacaccggattcgacaactgcgttccaaattctagcaccgtcacag 5906
Query: 62 tgtaatttgatatcgttttccaaacaccaccctttgatacggatcaattcttccaatggg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5905 tgtaatttgatatcgttttccaaacaccaccctttgatacggatcaattcttccaatggg 5846
Query: 122 taaacgataccgttgcaaagtgttttccaacgataacactcttgttggcgcaccgtgaat 181
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5845 taaacgataccgt-gcaaagtgttttccaacgataacactcttgttggcgcaccgtgaat 5787
Query: 182 atccccgtcgtcygggatgtaatgagccttgatatcttccaaagtcatataatcaccgtt 241
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5786 atccccgtcgtccgggatgtaatgagccttgatatcttccaaagtcatataatcaccgtt 5727
Query: 242 agatgggatcaccggagtgaccatcgcttgagacaagattgccaacccagctgcttcatg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5726 agatgggatcaccggagtgaccatcgcttgagacaagattgccaacccagctgcttcatg 5667
Query: 302 agtataaacatgagctctgtaatcacacaagatagagtatggaggttggaatagatgcgt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5666 agtataaacatgagctctgtaatcacacaagatagagtatggaggttggaatagatgcgt 5607
Query: 362 tctcaaaccaatttggttcgataaagtaccagagacacagaataacccggcttctttacc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5606 tctcaaaccaatttggttcgataaagtaccagagacacagaataacccggcttctttacc 5547
Query: 422 agctaaacgagctacgacggtttctagctcaatggtgtcgacgtcttcgttatagactgc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5546 agctaaacgagctacgacggtttctagctcaatggtgtcgacgtcttcgttatagactgc 5487
Query: 482 atcaccgatggaagcattgavagcagcttccaacatttccttagttggagtggtgaragt 541
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 5486 atcaccgatggaagcattgaaagcagcttccaacatttccttagttggagtggtgaaagt 5427
Query: 542 atcagaccgaagyantntggcagctgaggtgtaagctggctctgaaggagcagcagcagt 601
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5426 atcagaccgaaggtcattggcagctgaggtgtaagctggctctgaaggagcagcagcagt 5367
Query: 602 agatttcttatcagamgcagtcatttatgttgaattgatgtgatttagttttattggagg 661
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5366 agatttcttatcagaagcagtcatttatgttgaattgatgtgatttagttttattggagg 5307
Query: 662 ggttgaacctaaaataaaatggaactggtaatgttgttgtggattcacttaagtcaataa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5306 ggttgaacctaaaataaaatggaactggtaatgttgttgtggattcacttaagtcaataa 5247
Query: 722 agtatattatatatmmhcahagtgactaaatacaaaatataacccgttagktttgatcct 781
|||||||||||||| || |||||||||||||||||||||||||||||| |||||||||
Sbjct: 5246 agtatattatatataaacaaagtgactaaatacaaaatataacccgttaggtttgatcct 5187
Query: 782 ttgctatatatgatttty-hwtactgctctcaccatttataatc-aacaatatttatcac 839
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 5186 ttgctatatatgatttttatatactgctctcaccatttataatcaaacaatatttatcac 5127
Query: 840 tc-aactgccgatgagtaactcgacctgaaatatttcactgcttcaactttttccagcat 898
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5126 tcaaactgccgatgagtaactcgacctgaaatatttcactgcttcaactttttccagcat 5067
Query: 899 tgaggc-acaaacagaaaaa 917
|||||| |||||||||||||
Sbjct: 5066 tgaggcaacaaacagaaaaa 5047
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6998
Number of Sequences: 1807
Number of extensions: 6998
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)